23218 CwfJ_C_1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23218 chr_6 CwfJ_C_1 superfamily 1456397 1460277 - CwfJ_C_1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442739 Thaps23218.2, Thaps23218.1, Thaps23218.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0344

Most Highly Correlated Transcripts

bd933

(bd933) NA
0.9203

13448

Sec1
0.8619

21220

KU superfamily
0.8533

12836

EEP superfamily
0.8418

23217

hypothetical protein
0.8413

bd196

(bd196) Snf7 superfamily
0.8408

10894

hypothetical protein
0.8267

1986

MATE_like superfamily
0.8206

269169

Beach
0.8201

5185

RPN7 superfamily
0.8182

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CwfJ_C_1 superfamily Protein similar to CwfJ C-terminus 1; This region is found in the N terminus of Schizosaccharomyces... - 95.517 1.22E-22 790 - 899 superfamily 252738

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49146 PHATRDRAFT_49146 268177 288983 Not available Cre07.g338900.t1.1 AT5G56900.1 528823

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

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