25171 DUF1517 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25171 chr_16b DUF1517 superfamily 7750 9403 - DUF1517 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442570 Thaps25171.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0107

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0283
 0.35

Most Highly Correlated Transcripts

269541

M20_Acy1
0.8978

bd1840

(bd1840) NA
0.8776

bd409

(bd409) Snf7 superfamily
0.8775

21161

Patched
0.8616

21677

hypothetical protein
0.861

23771

hypothetical protein
0.8424

bd1877

(bd1877) NA
0.8331

30178

PLN03050
0.8318

20648

hypothetical protein
0.8282

40630

SPFH_like_u4
0.8233

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1517 superfamily Protein of unknown function (DUF1517); This family consists of several hypothetical glycine rich... - 113.963 1.02E-28 216 - 484 superfamily 261077

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45612 PHATRDRAFT_45612 162168 254835 364076 Cre01.g004450.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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