261255 Sec7
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261255 chr_2 Sec7 437403 443674 - Sec7

Synonyms

NCBI ID Ensembl Genomes exon ID
7448652 Thaps261255.2, Thaps261255.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0373

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

bd668

(bd668) NA
0.911

bd2073

(bd2073) psbB
0.9062

bd843

(bd843) NA
0.8995

bd1387

(bd1387) psbE
0.8848

bd1893

(bd1893) NA
0.8843

bd463

(bd463) Aa_trans superfamily
0.8825

bd529

(bd529) SNF2_N
0.8816

bd1304

(bd1304) Ycf4
0.8666

bd1313

(bd1313) psbH
0.8659

bd1758

(bd1758) NA
0.8618

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec7 Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... cl00136 153.147 1.82E-41 1543 - 1728 specific 238100
Sec7 superfamily Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... - 153.147 1.82E-41 1543 - 1728 superfamily 260210
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 93.5264 1.47E-21 1937 - 2038 superfamily 266526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49198 PHATRDRAFT_49198 182282 206004 Not available Not available Not available 467853

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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