26146 14-3-3Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
26146	chr_3	14-3-3	303147	304051	-	14-3-3

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441736	Thaps26146.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0212

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0105	0.42	10000 20000

Most Highly Correlated Transcripts

37123 (VAT2) V-ATPase_V1_A 0.8857	26136 MRS6 superfamily 0.8485	4460 hypothetical protein 0.8373	260936 HCO3_cotransp superfamily 0.8244	6480 P4Hc 0.8242	5622 hypothetical protein 0.8222
24184 ArfGap 0.819	8288 hypothetical protein 0.8178	35279 (H4_2) H4 0.8079	4589 hypothetical protein 0.8076

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
14-3-3		14-3-3 protein; 14-3-3 protein.	cl02098	414.658	1.42E-147	3 - 233	specific	249711
14-3-3 superfamily		14-3-3 domain; 14-3-3 domain is an essential part of 14-3-3 proteins, a ubiquitous class of...	-	414.658	1.42E-147	3 - 233	superfamily	261174

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_5651	PHATRDRAFT_5651	272557	41524	457856	Cre12.g559250.t1.2	AT1G26480.1	353822

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0019904 -

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