261602 ThiF_MoeB_HesA_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261602 chr_2 ThiF_MoeB_HesA_family 2515986 2518106 - ThiF_MoeB_HesA_family

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0155

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

bd1465

(bd1465) PKc_like superfamily
0.9038

bd624

(bd624) Glyco_transf_34 superfamily
0.9038

bd446

(bd446) HrpA
0.8834

bd392

(bd392) DEXDc
0.8807

bd894

(bd894) Peptidase_M14_like superfamily
0.8745

bd668

(bd668) NA
0.8514

262977

NA
0.8487

bd935

(bd935) TFIIS_I
0.8474

bd137

(bd137) Motor_domain superfamily
0.8464

6028

NA
0.8427

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis... cl17196 344.846 1.94E-114 268 - 498 specific 238386
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 344.846 1.94E-114 268 - 498 superfamily 266547
RHOD superfamily Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese... - 100.462 8.42E-25 537 - 653 superfamily 260205
PRK07411 hypothetical protein; Validated - 305.506 6.58E-97 253 - 653 multi-dom 180967

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34373 PHATRDRAFT_34373 194811 293997 Not available Cre09.g402034.t1.1 AT5G55130.1 286400

KEGG

KEGG description KEGG Pathway
Sulfur relay system map04122

GO Terms

GO:0003824 GO:0004842 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

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