261905 PRK05617
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261905 chr_3 PRK05617 1828363 1829504 - PRK05617

Synonyms

NCBI ID Ensembl Genomes exon ID
7445339 Thaps261905.2, Thaps261905.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0380

Most Highly Correlated Transcripts

3600

Bromodomain superfamily
0.8824

25016

ALDH-SF superfamily
0.8773

13448

Sec1
0.8616

261973

PKc_like superfamily
0.8511

2009

hypothetical protein
0.8474

2328

hypothetical protein
0.8412

12899

AAA
0.8389

25509

hypothetical protein
0.8373

5921

hypothetical protein
0.8342

1986

MATE_like superfamily
0.8331

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of... cl18948 125.366 5.64E-34 12 - 210 specific 119339
crotonase-like superfamily Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of... - 125.366 5.64E-34 12 - 210 superfamily 267301
ECH_C superfamily 2-enoyl-CoA Hydratase C-terminal region; This is the C-terminal region of enoyl-CoA hydratase. - 155.712 2.77E-46 242 - 363 superfamily 258052
ECH_C superfamily 2-enoyl-CoA Hydratase C-terminal region; This is the C-terminal region of enoyl-CoA hydratase. - 155.712 2.77E-46 242 - 363 superfamily 258052
PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional - 347.192 1.92E-117 12 - 363 multi-dom 235533

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54528 PHATRDRAFT_54528 223467 170220 426375 Cre06.g278215.t1.1 AT2G30660.1 554783

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0003824 GO:0008152 GO:0004300 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0004300

enoyl-CoA hydratase activity

Details: 
Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2-enoyl-CoA + H2O.
GO Category: 
MF

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