262880 IlvBThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262880	chr_6	IlvB	1040446	1043324	-	IlvB

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442362	Thaps262880.3, Thaps262880.1, Thaps262880.5, Thaps262880.4, Thaps262880.2, Thaps262880.6

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0423

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0073	0.47	0.000041 8.2

Most Highly Correlated Transcripts

bd415 (bd415) arom_aa_hydroxylase superfamily 0.9175	21090 hypothetical protein 0.9079	268652 ATG11 superfamily 0.9014	bd410 (bd410) HNHc 0.8996	30701 PRK05279 0.8972	1186 hypothetical protein 0.8941
bd1934 (bd1934) NA 0.8931	bd1841 (bd1841) CAP10 superfamily 0.8929	268011 Peptidase_M8 superfamily 0.8926	24482 hypothetical protein 0.8913

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPP_enzymes		Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes...	cl01629	105.801	4.67E-26	304 - 477	specific	238318
TPP_enzymes superfamily		Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes...	-	105.801	4.67E-26	304 - 477	superfamily	261022
TPP_enzyme_N		Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-...	cl11410	144.3	1.34E-39	1 - 168	specific	251523
TPP_enzyme_PYR superfamily		Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine...	-	144.3	1.34E-39	1 - 168	superfamily	264357
IlvB		Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome...	-	274.14	4.21E-82	2 - 484	multi-dom	223107

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54355	PHATRDRAFT_54355	210060	Not available	233263	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003984 -

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