268011 Peptidase_M8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268011 chr_1 Peptidase_M8 superfamily 1253890 1256524 + Peptidase_M8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445033 Thaps268011.1, Thaps268011.3, Thaps268011.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0423

Most Highly Correlated Transcripts

264621

COG3899
0.9022

6608

CAP10 superfamily
0.9022

8460

hypothetical protein
0.8948

262880

IlvB
0.8926

9677

hypothetical protein
0.8922

1249

hypothetical protein
0.8918

21090

hypothetical protein
0.8907

7645

Aldo_ket_red superfamily
0.8861

22661

hypothetical protein
0.8804

5153

hypothetical protein
0.8794

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M8 superfamily Leishmanolysin; Leishmanolysin. - 106.029 3.58E-24 302 - 737 superfamily 267835

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0007155 GO:0016020 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0007155

cell adhesion

Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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