263180 SufS_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263180 chr_7 SufS_like 921109 922716 - SufS_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7449245 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0092
 0.42

Most Highly Correlated Transcripts

261400

NA
0.9245

269624

TIM_phosphate_binding superfamily
0.9064

13393

PLN02321
0.9017

9534

(FGS1) FolC
0.8945

37934

GRX_PICOT_like
0.8942

5504

hypothetical protein
0.8907

30701

PRK05279
0.8898

31829

CBS_like
0.8885

40801

Trans_IPPS_HT
0.888

1773

hypothetical protein
0.8858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent... cl18945 600.607 133 - 514 specific 99746
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 600.607 133 - 514 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19482 PHATRDRAFT_19482 180351 246929 Not available Cre12.g525650.t1.2 AT1G08490.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0008483 GO:0006534 GO:0030170 GO:0031071 GO:0009000 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0006534

cysteine metabolic process

Details: 
The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid.
GO Category: 
BP

GO:0030170

pyridoxal phosphate binding

Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO Category: 
MF

GO:0031071

cysteine desulfurase activity

Details: 
Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.
GO Category: 
MF

GO:0009000

selenocysteine lyase activity

Details: 
Catalysis of the reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + L-alanine + acceptor.
GO Category: 
MF

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