264410 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264410 chr_17 MFS 69928 71957 + MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7453112 Thaps264410.3, Thaps264410.1, Thaps264410.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0122

Most Highly Correlated Transcripts

bd1941

(bd1941) NA
0.9606

bd410

(bd410) HNHc
0.9349

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9316

268652

ATG11 superfamily
0.9027

6911

(Tp_CCCH10) regulator [Rayko]
0.9024

bd1841

(bd1841) CAP10 superfamily
0.901

263866

AAK superfamily
0.8951

25094

PseudoU_synth_RluCD_like
0.8846

17919

COG1741
0.8836

240

AAT_I superfamily
0.8833

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 128.2 5.37E-33 76 - 475 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 128.2 5.37E-33 76 - 475 superfamily 119392
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 120.988 1.79E-30 78 - 464 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32014 PHATRDRAFT_32014 197647 319675 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0005215 GO:0006810 GO:0016021 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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