264534 Aa_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264534 chr_18 Aa_trans superfamily 587532 589690 + Aa_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444801 Thaps264534.2, Thaps264534.3, Thaps264534.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

261357

NAD_binding_8 superfamily
0.9046

263610

COG3899
0.8815

31276

MORN superfamily
0.8812

263599

COG3899
0.8744

10588

hypothetical protein
0.8713

31193

Indigoidine_A
0.8705

263051

ZntA
0.8691

263483

CHD
0.8592

270222

0.8571

261430

Aa_trans superfamily
0.8563

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aa_trans superfamily Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid... - 157.074 3.14E-42 51 - 425 superfamily 266708

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49073 PHATRDRAFT_49073 189699 218919 457373 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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