264862 ANK
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264862 chr_22 ANK 873711 874832 + ANK

Synonyms

NCBI ID Ensembl Genomes exon ID
7449420 Thaps264862.3, Thaps264862.1, Thaps264862.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0005

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0173
 0.35

Most Highly Correlated Transcripts

270222

0.9711

39497

Sar1
0.9

4321

HAD_2
0.8977

21249

hypothetical protein
0.8927

39299

(ARF3) Arf1_5_like
0.8884

25068

hypothetical protein
0.8835

36641

Aldolase_Class_I superfamily
0.8835

18462

EMP24_GP25L
0.8829

25025

PHear_NECAP
0.8819

26470

(GFS1) PLN02725
0.8742

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 99.3802 5.51E-26 138 - 248 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 99.3802 5.51E-26 138 - 248 superfamily 238125
ACBP Acyl CoA binding protein; Acyl CoA binding protein. cl00221 79.9153 2.14E-19 59 - 132 specific 250204
ACBP superfamily Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-... - 79.9153 2.14E-19 59 - 132 superfamily 260274
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 84.615 5.55E-21 135 - 227 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd313 PHATRDRAFT_bd313 152670 173795 433117 Cre03.g173350.t1.2 AT5G53470.1 353557

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000062 -

GO:0000062

fatty-acyl-CoA binding

Details: 
Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.
GO Category: 
MF

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