268118 WD40
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268118 chr_1 WD40 2530927 2534113 - WD40

Synonyms

NCBI ID Ensembl Genomes exon ID
7445494 Thaps268118.1, Thaps268118.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0243

Most Highly Correlated Transcripts

25214

PRK02224
0.9203

268550

(ALD1) ALDH-SF superfamily
0.914

22620

(Tp_AP2-EREBP1) regulator [Rayko]
0.9089

25142

SWIRM
0.9077

12899

AAA
0.9033

25270

hypothetical protein
0.9026

261324

PLN02724
0.9025

23769

hypothetical protein
0.8966

21922

hypothetical protein
0.8931

22252

hypothetical protein
0.8926

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 220.669 4.54E-66 296 - 609 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 220.669 4.54E-66 296 - 609 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 162.18 1.73E-43 248 - 652 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12028 PHATRDRAFT_12028 205961 256696 457509 Cre12.g527500.t1.2 AT5G67320.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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