268280 (LAT2) PDHac_trf_mito
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268280 chr_2 (LAT2) PDHac_trf_mito 1227396 1229211 + PDHac_trf_mito

Synonyms

NCBI ID Ensembl Genomes exon ID
7450392 Thaps268280.2, Thaps268280.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

264005

Glyco_hydrolase_16 superfamily
0.9149

36007

Aldolase_II superfamily
0.9095

268374

(PDHA1) TPP_E1_PDC_ADC_BCADC
0.8956

8778

(PDHB1) PLN02683
0.8897

267971

MORN superfamily
0.8887

31818

Mito_carr
0.8846

19158

GRX_PICOT_like
0.8823

269160

(gltD) GltD
0.8817

37497

cysE
0.8783

35136

NA
0.8768

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-... cl11404 99.4011 2.05E-25 62 - 131 specific 133458
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 99.4011 2.05E-25 62 - 131 superfamily 264355
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 163.106 8.08E-47 292 - 508 superfamily 249671
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 163.106 8.08E-47 292 - 508 superfamily 249671
PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model represents... - 346.391 6.62E-114 59 - 508 multi-dom 233367

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17401 PHATRDRAFT_17401 170993 195095 62303 Cre09.g386735.t1.1 AT1G54220.2 562723

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0008415 GO:0005515 GO:0004742 GO:0009351 GO:0030523 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008415

NA

Details: 
NA
GO Category: 
NA

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0004742

dihydrolipoyllysine-residue acetyltransferase activity

Details: 
Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide.
GO Category: 
MF

GO:0009351

NA

Details: 
NA
GO Category: 
NA

GO:0030523

dihydrolipoamide S-acyltransferase activity

Details: 
Catalysis of the reaction: acyl-CoA + dihydrolipoamide = CoA + S-acyldihydrolipoamide.
GO Category: 
MF

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