268362 (Tp_AP2-EREBP2) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268362 chr_2 (Tp_AP2-EREBP2) regulator [Rayko] 2061237 2062100 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7452500 Thaps268362.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0478

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0057
 0.46

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9184

30701

PRK05279
0.9103

31993

DUF3449
0.8974

18662

ADK
0.8967

268257

fabG
0.8958

267979

HCO3_cotransp superfamily
0.8935

39726

NrfG
0.8924

21464

BTB
0.8924

38957

2-oxoacid_dh
0.8912

260856

NBD_sugar-kinase_HSP70_actin superfamily
0.8909

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55073 PHATRDRAFT_55073 270155 42459 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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