268443 SAICAR_synt_Sc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268443 chr_3 SAICAR_synt_Sc 558107 559479 + SAICAR_synt_Sc

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps268443.3, Thaps268443.1, Thaps268443.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0295

Most Highly Correlated Transcripts

270389

hypothetical protein
0.9998

24619

2-Hacid_dh_1
0.9655

1175

hypothetical protein
0.9577

36476

WD40 superfamily
0.9552

37100

Zn-ribbon_RPC11
0.9484

6953

PRK11713
0.9472

32894

Ribosomal_L13
0.9457

32827

MPP_PP2A_PP4_PP6
0.9451

11563

hypothetical protein
0.945

2622

hypothetical protein
0.9434

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase;... cl00231 386.904 7.09E-134 87 - 356 specific 133469
SAICAR_synt superfamily 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; SAICAR synthetase (the... - 386.904 7.09E-134 87 - 356 superfamily 260283
PRK13959 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional - 107.459 1.48E-26 86 - 360 multi-dom 237570

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18080 PHATRDRAFT_18080 159093 320105 423817 Cre03.g202113.t1.1 AT3G21110.2 513619

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004639 GO:0006164 -

GO:0004639

phosphoribosylaminoimidazolesuccinocarboxamide synthase activity

Details: 
Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate + ATP = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate.
GO Category: 
MF

GO:0006164

purine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO Category: 
BP

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