24619 2-Hacid_dh_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24619 chr_13 2-Hacid_dh_1 278491 279274 - 2-Hacid_dh_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7445724 Thaps24619.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0190

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9655

1676

hypothetical protein
0.9414

24051

hypothetical protein
0.933

32314

LSm2
0.9288

5101

UbiE
0.9279

36476

WD40 superfamily
0.9235

37100

Zn-ribbon_RPC11
0.9176

19158

GRX_PICOT_like
0.9155

3959

KPHMT-like
0.9154

3890

COG0398
0.9145

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2-Hacid_dh_1 Putative D-isomer specific 2-hydroxyacid dehydrogenase; 2-Hydroxyacid dehydrogenases catalyze the... cl17240 315.23 3.07E-107 12 - 249 specific 240625
FDH_GDH_like superfamily Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related... - 315.23 3.07E-107 12 - 249 superfamily 266580
SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] - 226.041 2.55E-72 18 - 249 multi-dom 223189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 211398 Not available 47610 Not available Not available 350536

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006564 GO:0016616 GO:0030267 -

GO:0006564

L-serine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
GO Category: 
BP

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

GO:0030267

glyoxylate reductase (NADP) activity

Details: 
Catalysis of the reaction: glycolate + NADP+ = glyoxylate + NADPH + H+.
GO Category: 
MF

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