269255 PLN02339
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269255 chr_7 PLN02339 1142744 1146316 - PLN02339

Synonyms

NCBI ID Ensembl Genomes exon ID
7444160 Thaps269255.2, Thaps269255.3, Thaps269255.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0323

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.8952

38475

HA2
0.8855

260852

PRK04194
0.8772

39592

(NRT3) 2A0108
0.865

bd446

(bd446) HrpA
0.8594

263203

Amidase superfamily
0.8579

10554

hypothetical protein
0.8455

30969

(Tp_Myb1R11) COG5114
0.8451

28004

hypothetical protein
0.8426

9503

PTZ00121
0.8358

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GAT_Gln-NAD-synth Glutamine aminotransferase (GAT, glutaminase) domain of glutamine-dependent NAD synthetases (class... cl11424 283.977 1.89E-89 49 - 337 specific 143594
nitrilase superfamily Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes... - 283.977 1.89E-89 49 - 337 superfamily 264361
NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine... cl00292 244.379 1.08E-74 377 - 710 specific 238309
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 244.379 1.08E-74 377 - 710 superfamily 260331
PLN02339 NAD+ synthase (glutamine-hydrolysing) - 1332.4 0 45 - 761 multi-dom 177973

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45509 PHATRDRAFT_45509 199791 150391 460331 Cre10.g435250.t1.1 AT1G55090.1 556406

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006807 GO:0016810 GO:0003952 GO:0005524 GO:0009435 -

GO:0006807

nitrogen compound metabolic process

Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO Category: 
BP

GO:0016810

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Details: 
Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.
GO Category: 
MF

GO:0003952

NAD+ synthase (glutamine-hydrolyzing) activity

Details: 
Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0009435

NAD biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.
GO Category: 
BP

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