269710 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269710 chr_13 NADB_Rossmann superfamily 944906 946652 - NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450522 Thaps269710.3, Thaps269710.2, Thaps269710.4, Thaps269710.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0240

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0233
 0.34

Most Highly Correlated Transcripts

3416

TPR
0.9177

4372

hypothetical protein
0.9008

21305

hypothetical protein
0.8995

261893

Ofd1_CTDD
0.8971

268443

SAICAR_synt_Sc
0.8814

25359

hypothetical protein
0.8747

20621

hypothetical protein
0.8729

4487

hypothetical protein
0.8667

267979

HCO3_cotransp superfamily
0.8657

10612

SseA
0.865

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 154.019 4.30E-44 153 - 378 superfamily 263925
PRK12828 short chain dehydrogenase; Provisional - 62.5066 1.43E-11 153 - 377 multi-dom 237220

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_21181 PHATR_21181 225343 161025 Not available Not available Not available 248383

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0016491 GO:0004155 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004155

6,7-dihydropteridine reductase activity

Details: 
Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine.
GO Category: 
MF

Add comment

Log in to post comments