30971 MIR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
30971 chr_1 MIR 1452305 1452881 - MIR

Synonyms

NCBI ID Ensembl Genomes exon ID
7445243 Thaps30971.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0173

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0137
 0.33

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9274

262525

(PSB5) proteasome_beta_type_5
0.9075

262994

COG0637
0.9055

23958

Aldose_epim superfamily
0.9044

37118

FeThRed_B
0.9017

887

Bromodomain superfamily
0.9002

11746

hypothetical protein
0.8998

269624

TIM_phosphate_binding superfamily
0.8988

23024

hypothetical protein
0.8934

3098

MCT1_N
0.8934

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases; Domain... cl19745 55.4251 3.53E-11 67 - 120 specific 197746
Ins145_P3_rec superfamily Inositol 1,4,5-trisphosphate/ryanodine receptor; This domain corresponds to the ligand binding... - 55.4251 3.53E-11 67 - 120 superfamily 268098

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15472 PHATRDRAFT_15472 142989 207734 Not available Cre13.g571750.t1.2 AT2G25110.1 482323

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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