33919 MPC superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33919	chr_4	MPC superfamily	1323469	1324505	+	MPC superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448800	Thaps33919.1, Thaps33919.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0098

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0181	0.40	44000 0.00011

Most Highly Correlated Transcripts

3768 hypothetical protein 0.9376	36641 Aldolase_Class_I superfamily 0.9177	26991 GRX_GRXh_1_2_like 0.9145	4578 hypothetical protein 0.9123	261981 0.9101	261400 NA 0.9074
bd393 (bd393) nst superfamily 0.8989	22673 NA 0.8975	33466 Sm_multidrug_ex 0.8949	268840 CBS_pair_10 0.8939

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPC superfamily		Uncharacterized protein family (UPF0041); Uncharacterized protein family (UPF0041).	-	77.1779	7.97E-18	86 - 173	superfamily	252085
MPC superfamily		Uncharacterized protein family (UPF0041); Uncharacterized protein family (UPF0041).	-	77.1779	7.97E-18	86 - 173	superfamily	252085

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14636	PHATRDRAFT_14636	155165	254328	437003	Cre10.g433400.t1.2	AT4G22310.1	286493

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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