34379 NIF
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34379 chr_5 NIF 1933400 1935473 - NIF

Synonyms

NCBI ID Ensembl Genomes exon ID
7442265 Thaps34379.2, Thaps34379.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0086

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0241
 0.29

Most Highly Correlated Transcripts

bd843

(bd843) NA
0.9738

bd1214

(bd1214) KISc_C_terminal
0.9714

bd950

(bd950) NA
0.9524

bd439

(bd439) POLBc_alpha
0.9406

bd890

(bd890) NA
0.9403

bd1306

(bd1306) NA
0.9396

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9392

bd1081

(bd1081) NA
0.9378

2085

hypothetical protein
0.9273

bd529

(bd529) SNF2_N
0.9267

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NIF NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... cl17354 234.846 3.28E-73 469 - 630 specific 251684
NIF superfamily NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... - 234.846 3.28E-73 469 - 630 superfamily 266644

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15563 PHATRDRAFT_15563 166268 295439 436342 Cre09.g391541.t1.1 AT5G11860.4 311755

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000158 GO:0004721 GO:0004723 GO:0004724 GO:0005963 GO:0008420 GO:0008597 GO:0015071 GO:0017018 GO:0017020 GO:0017023 GO:0030357 -

GO:0000158

NA

Details: 
NA
GO Category: 
NA

GO:0004721

phosphoprotein phosphatase activity

Details: 
Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
GO Category: 
MF

GO:0004723

calcium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.
GO Category: 
MF

GO:0004724

magnesium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of magnesium.
GO Category: 
MF

GO:0005963

magnesium-dependent protein serine/threonine phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.
GO Category: 
CC

GO:0008420

CTD phosphatase activity

Details: 
Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate.
GO Category: 
MF

GO:0008597

calcium-dependent protein serine/threonine phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.
GO Category: 
MF

GO:0015071

NA

Details: 
NA
GO Category: 
NA

GO:0017018

myosin phosphatase activity

Details: 
Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.
GO Category: 
MF

GO:0017020

myosin phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme myosin phosphatase.
GO Category: 
MF

GO:0017023

myosin phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of the phosphate group from phosphomyosin.
GO Category: 
CC

GO:0030357

NA

Details: 
NA
GO Category: 
NA

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