34925 SNF2_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34925 chr_6 SNF2_N 146949 151158 - SNF2_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7442330 Thaps34925.1, Thaps34925.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0257

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9717

36007

Aldolase_II superfamily
0.9276

268257

fabG
0.9224

268144

OTU
0.921

268443

SAICAR_synt_Sc
0.9198

31993

DUF3449
0.919

32216

(RT5) rpsE_bact
0.9153

261567

TPR
0.9084

36366

Ape1-like_AP-endo
0.9079

37100

Zn-ribbon_RPC11
0.9067

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 84.2116 1.60E-18 1215 - 1351 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 84.2116 1.60E-18 1215 - 1351 superfamily 238034
SNF2_N SNF2 family N-terminal domain; This domain is found in proteins involved in a variety of processes... - 153.596 1.01E-40 609 - 1010 multi-dom 249654

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12310 PHATRDRAFT_12310 136653 Not available 230858 Not available AT5G22750.1 317996

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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