35116 SF3b10
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35116 chr_6 SF3b10 1655648 1655938 + SF3b10

Synonyms

NCBI ID Ensembl Genomes exon ID
7442777 Thaps35116.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0181

Most Highly Correlated Transcripts

9462

hypothetical protein
0.9004

14924

Lung_7-TM_R superfamily
0.8907

22822

NTF2
0.8871

27986

LMBR1 superfamily
0.8788

34266

(RM17) rplQ
0.8741

3378

DUF775 superfamily
0.8714

2284

hypothetical protein
0.8713

1819

hypothetical protein
0.8701

5552

hypothetical protein
0.8663

41694

hypothetical protein
0.8648

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SF3b10 superfamily Splicing factor 3B subunit 10 (SF3b10); This family consists of several eukaryotic splicing factor... - 118.96 5.89E-36 12 - 80 superfamily 148662
SF3b10 superfamily Splicing factor 3B subunit 10 (SF3b10); This family consists of several eukaryotic splicing factor... - 118.96 5.89E-36 12 - 80 superfamily 148662

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10566 PHATR_10566 197536 235122 360234 Cre14.g627900.t1.2 AT4G14342.1 259151

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

Not available -

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