35180 Mpv17_PMP22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35180 chr_6 Mpv17_PMP22 1405975 1406371 - Mpv17_PMP22

Synonyms

NCBI ID Ensembl Genomes exon ID
7453291 Thaps35180.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0106

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0063
 0.47

Most Highly Correlated Transcripts

bd1095

(bd1095) NA
0.8798

bd1094

(bd1094) FH2 superfamily
0.849

bd1360

(bd1360) ycf24
0.8481

2845

Chloroa_b-bind superfamily
0.8387

32964

PLN00090
0.8345

262313

Chloroa_b-bind superfamily
0.8335

bd794

(bd794) NA
0.8275

31749

Chloroa_b-bind superfamily
0.8261

bd2088

(bd2088) rbcL
0.8247

1449

hypothetical protein
0.8234

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 65.7148 3.95E-15 62 - 129 superfamily 252388
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 65.7148 3.95E-15 62 - 129 superfamily 252388

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12379 PHATRDRAFT_12379 206674 307946 Not available Not available AT3G24570.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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