35818 Ras_like_GTPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35818 chr_8 Ras_like_GTPase superfamily 204175 205333 - Ras_like_GTPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443464 Thaps35818.2, Thaps35818.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0437

Most Highly Correlated Transcripts

33199

(TpSec4b) Rab8_Rab10_Rab13_like
0.8314

33126

Rab8_Rab10_Rab13_like
0.8227

10025

WD40 superfamily
0.812

bd789

(bd789) ABC_ATPase superfamily
0.8046

35728

FtsZ_type1
0.8028

bd858

(bd858) COG3899
0.7768

262925

FAA1
0.7739

37118

FeThRed_B
0.7728

15398

FtsZ_type1
0.7726

270222

0.7667

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 264.912 5.51E-89 56 - 242 superfamily 266525
RAN Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases; Ran is involved in the active... - 78.8999 5.80E-18 61 - 275 multi-dom 128473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51199 PHATRDRAFT_51199 162382 302158 351420 Cre06.g311900.t1.2 AT1G49300.2 284160

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0005525 GO:0007264 GO:0000160 GO:0003677 GO:0006355 GO:0015031 GO:0003924 GO:0003925 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0007264

small GTPase mediated signal transduction

Details: 
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO Category: 
BP

GO:0000160

phosphorelay signal transduction system

Details: 
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0003925

NA

Details: 
NA
GO Category: 
NA

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