36088 PTZ00168
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36088 chr_8 PTZ00168 618072 619028 + PTZ00168

Synonyms

NCBI ID Ensembl Genomes exon ID
7445605 Thaps36088.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0372

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0045
 0.44

Most Highly Correlated Transcripts

36525

PRK09427
0.8839

37539

cpn10
0.863

38964

Chorismate_synthase
0.8565

5293

PRK00772
0.8559

261278

GRX_GRXh_1_2_like
0.8516

36007

Aldolase_II superfamily
0.8508

24525

hypothetical protein
0.8496

269320

(DGD2) UGD_SDR_e
0.8457

30701

PRK05279
0.8309

37497

cysE
0.8307

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 57.6443 8.21E-11 33 - 105 superfamily 249634
PTZ00168 mitochondrial carrier protein; Provisional - 127.733 1.19E-34 37 - 304 multi-dom 185494

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14366 PHATRDRAFT_14366 212621 258872 44452 Cre06.g286250.t1.2 AT1G34065.1 353846

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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