269320 (DGD2) UGD_SDR_e
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269320 chr_8 (DGD2) UGD_SDR_e 61323 62791 - UGD_SDR_e
NCBI ID Ensembl Genomes exon ID
7443434 Thaps269320.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205
Normalized Mean Residue
Thaps_bicluster_0246
0.41
FBPase
0.9127
WD40 superfamily
0.9037
HMGB-UBF_HMG-box
0.9024
(ARF3) Arf1_5_like
0.8931
UMP_CMP_kin_fam
0.887
hypothetical protein
0.8848
PLN00162
0.8827
Rab6
0.8801
(RPN8) PLN03246
0.8775
hypothetical protein
0.8774
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UGD_SDR_e UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs; UGD catalyzes the... cl09931 613.49 0 60 - 363 specific 187541
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 613.49 0 60 - 363 superfamily 263925
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 244.466 1.43E-77 60 - 363 multi-dom 223528
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 437443 Cre03.g169400.t1.2 Not available 284829
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0003824 GO:0009225 GO:0005975 GO:0016857 GO:0008460 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

nucleotide-sugar metabolic process

Details: 
The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
GO Category: 
BP

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

racemase and epimerase activity, acting on carbohydrates and derivatives

Details: 
Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.
GO Category: 
MF

dTDP-glucose 4,6-dehydratase activity

Details: 
Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H(2)O.
GO Category: 
MF
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