36310 Peptidase_M48
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36310 chr_10 Peptidase_M48 945370 947170 - Peptidase_M48

Synonyms

NCBI ID Ensembl Genomes exon ID
7450767 Thaps36310.2, Thaps36310.4, Thaps36310.3, Thaps36310.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0148
 0.34

Most Highly Correlated Transcripts

4524

DHQS
0.8616

16295

FBPase
0.8596

35402

(ALAT_2) PTZ00377
0.8556

268908

Trans_IPPS_HH
0.8461

2352

ClpS
0.8458

13393

PLN02321
0.8368

31674

transporter
0.836

22871

hypothetical protein
0.8322

28125

PLN00203
0.8305

9247

hypothetical protein
0.8253

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M48 Peptidase family M48; Peptidase family M48. cl12018 173.011 2.21E-50 259 - 491 specific 250620
Peptidase_M48 superfamily Peptidase family M48; Peptidase family M48. - 173.011 2.21E-50 259 - 491 superfamily 264511

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28833 PHATRDRAFT_28833 214868 249202 426446 Cre07.g356150.t1.2 AT4G01320.1 250864

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0016020 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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