37516 Mpv17_PMP22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37516 chr_14 Mpv17_PMP22 177250 178474 - Mpv17_PMP22

Synonyms

NCBI ID Ensembl Genomes exon ID
7450838 Thaps37516.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0027

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0081
 0.42

Most Highly Correlated Transcripts

36078

PRX5_like
0.9389

14192

PLN02449
0.9015

38924

PLN02627
0.9014

bd1765

(bd1765) NA
0.8979

19058

CTP_transf_1 superfamily
0.8925

268343

NA
0.8919

36037

Trypsin_2
0.8902

16075

tpt
0.8875

260846

steroid binding protein 1
0.8863

bd1893

(bd1893) NA
0.885

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 69.5668 4.84E-15 346 - 400 superfamily 252388
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 69.5668 4.84E-15 346 - 400 superfamily 252388

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16592 PHATRDRAFT_16592 185644 201371 56404 Not available AT5G43140.1 Not available

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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