38360 Peptidase_C1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38360 chr_19c_29 Peptidase_C1 superfamily 69530 70683 + Peptidase_C1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451827 Thaps38360.1, Thaps38360.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0424

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9089

41632

Asp
0.8981

15093

Peptidase_S10 superfamily
0.893

16390

Peptidase_C1A
0.8871

20708

MPP_ACP5
0.8761

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8711

bd690

(bd690) NA
0.8573

bd877

(bd877) NA
0.8563

bd1841

(bd1841) CAP10 superfamily
0.85

bd1941

(bd1941) NA
0.8374

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 260.038 3.79E-85 33 - 293 superfamily 260335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_4936 PHATRDRAFT_4936 Not available 248008 446652 Cre02.g119900.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008234 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

Add comment

Log in to post comments