38514 DUF3593
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38514 chr_20 DUF3593 574848 576212 - DUF3593

Synonyms

NCBI ID Ensembl Genomes exon ID
7447761 Thaps38514.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0156

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0033
 0.48

Most Highly Correlated Transcripts

270222

0.9845

bd1820

(bd1820) Fasciclin
0.9304

bd1645

(bd1645) tpt
0.9299

4108

hypothetical protein
0.9273

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9195

bd1306

(bd1306) NA
0.9192

bd1765

(bd1765) NA
0.907

bd218

(bd218) Chloroa_b-bind superfamily
0.9022

bd1387

(bd1387) psbE
0.8993

bd208

(bd208) DUF3529
0.8931

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3593 superfamily Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This... - 113.085 2.06E-30 85 - 173 superfamily 192948
DUF3593 superfamily Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This... - 113.085 2.06E-30 85 - 173 superfamily 192948
DUF2499 superfamily Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes... - 104.977 1.49E-27 251 - 338 superfamily 256124
DUF2499 superfamily Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes... - 104.977 1.49E-27 251 - 338 superfamily 256124

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8301 PHATRDRAFT_8301 165007 Not available 115906 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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