41216 PLN00022
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41216 chr_6 PLN00022 1801671 1803039 + PLN00022

Synonyms

NCBI ID Ensembl Genomes exon ID
7446335 Thaps41216.2, Thaps41216.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

bd1787

(bd1787) GLTP
0.917

bd1808

(bd1808) NA
0.9063

bd1472

(bd1472) rpmG
0.8929

bd1793

(bd1793) NA
0.8898

bd1786

(bd1786) GLTP superfamily
0.8688

7032

DUF2358 superfamily
0.8634

26769

ERG4_ERG24 superfamily
0.8429

2148

DUF1826 superfamily
0.8408

3310

hypothetical protein
0.8399

4007

MDR1
0.8381

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various... cl00292 114.961 1.26E-30 35 - 202 specific 238848
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 114.961 1.26E-30 35 - 202 superfamily 260331
ETF_alpha superfamily Electron transfer flavoprotein FAD-binding domain; This domain found at the C-terminus of electron... - 151.552 2.57E-45 221 - 306 superfamily 189709
ETF_alpha superfamily Electron transfer flavoprotein FAD-binding domain; This domain found at the C-terminus of electron... - 151.552 2.57E-45 221 - 306 superfamily 189709
PLN00022 electron transfer flavoprotein subunit alpha; Provisional - 496.239 3.13E-176 8 - 343 multi-dom 215032

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12373 PHATRDRAFT_12373 268163 257829 441629 Cre16.g687950.t1.2 AT1G50940.1 354931

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

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