6458 Ssu72 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6458	chr_6	Ssu72 superfamily	1623180	1627064	-	Ssu72 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444566	Thaps6458.5, Thaps6458.1, Thaps6458.6, Thaps6458.2, Thaps6458.4, Thaps6458.7, Thaps6458.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0128

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0080	0.40	0.0016 0.000042

Most Highly Correlated Transcripts

21220 KU superfamily 0.8961	3929 Peptidase_C48 superfamily 0.895	8562 hypothetical protein 0.8917	25288 Sec6 superfamily 0.8903	22437 CTNNBL superfamily 0.8851	1985 hypothetical protein 0.8834
21843 hypothetical protein 0.8833	263010 KU superfamily 0.8822	16613 S_TKc 0.8802	950 hypothetical protein 0.8797

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ssu72 superfamily		Ssu72-like protein; The highly conserved and essential protein Ssu72 has intrinsic phosphatase...	-	168.558	2.47E-47	41 - 213	superfamily	261201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_13834	PHATRDRAFT_13834	201174	319948	Not available	Cre02.g145300.t1.2	AT1G73820.1	353833

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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