6826 PH-like superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6826	chr_7	PH-like superfamily	582408	585681	-	PH-like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448992	Thaps6826.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0400

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0152	0.38	0.14 0.024

Most Highly Correlated Transcripts

20907 hypothetical protein 0.9132	1172 hypothetical protein 0.8898	1748 hypothetical protein 0.8873	4573 hypothetical protein 0.8773	4482 hypothetical protein 0.8763	23086 hypothetical protein 0.8727
25198 HA 0.8694	24178 (Tp_Hox3) regulator [Rayko] 0.8693	7121 DUF3684 superfamily 0.8671	262157 E1_like_apg7 0.8653

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	63.0692	1.22E-11	207 - 340	superfamily	266526

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44944	PHATRDRAFT_44944	248319	243571	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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