8793 DUF328Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8793	chr_11a	DUF328	544504	545786	+	DUF328

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448342	Thaps8793.2, Thaps8793.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0028

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0183	0.30	0.00000033 24

Most Highly Correlated Transcripts

18469 FkpA 0.9079	4876 hypothetical protein 0.9058	7191 Aldo_ket_red 0.9047	13922 2A0303 0.9022	6348 GGCT_like 0.8991	2488 hypothetical protein 0.8977
17707 NADB_Rossmann superfamily 0.8946	1219 PAP_fibrillin superfamily 0.8922	9513 hypothetical protein 0.8916	8872 hypothetical protein 0.8911

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF328		Protein of unknown function (DUF328); Members of this family are functionally uncharacterized. They...	cl01143	200.063	1.90E-61	68 - 333	specific	252226
DUF328 superfamily		Protein of unknown function (DUF328); Members of this family are functionally uncharacterized. They...	-	200.063	1.90E-61	68 - 333	superfamily	260809

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_11743	PHATRDRAFT_11743	151777	314422	118036	Not available	Not available	472603

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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