8808 COG0398
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8808 chr_11a COG0398 590446 591729 + COG0398

Synonyms

NCBI ID Ensembl Genomes exon ID
7448352 Thaps8808.2, Thaps8808.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0060

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0088
 0.37

Most Highly Correlated Transcripts

bd208

(bd208) DUF3529
0.902

bd1652

(bd1652) ABC_ATPase superfamily
0.8995

bd211

(bd211) Maf_Ham1 superfamily
0.878

bd1306

(bd1306) NA
0.8767

bd1403

(bd1403) NA
0.8755

34554

(psbW) PLN00039
0.8719

bd1863

(bd1863) NA
0.8572

12899

AAA
0.8534

ThpsCp134

(rpl34) ribosomal protein L34
0.8517

bd1342

(bd1342) psaL
0.8478

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0398 Uncharacterized conserved protein [Function unknown] cl00429 97.3959 8.48E-24 200 - 334 specific 223475
SNARE_assoc superfamily SNARE associated Golgi protein; This is a family of SNARE associated Golgi proteins. The yeast... - 97.3959 8.48E-24 200 - 334 superfamily 260418

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31234 PHATRDRAFT_31234 160756 168382 96820 Cre01.g043050.t1.2 AT1G22850.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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