9707 rad18
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9707 chr_14 rad18 151629 153341 + rad18

Synonyms

NCBI ID Ensembl Genomes exon ID
7450830 Thaps9707.1, Thaps9707.3, Thaps9707.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0169

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.893

10774

hypothetical protein
0.8928

8015

hypothetical protein
0.8805

6997

hypothetical protein
0.8732

31993

DUF3449
0.8722

3570

PP2Cc
0.8694

36419

RabGAP-TBC
0.8682

36641

Aldolase_Class_I superfamily
0.8675

24454

zf-DHHC
0.8668

8432

TAF7
0.8661

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
rad18 DNA repair protein rad18; All proteins in this family for which functions are known are involved in... - 63.8688 3.14E-11 216 - 365 multi-dom 233043

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43821 PHATR_43821 Not available 243625 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0004308 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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