9830 (CBL1) CGS_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9830 chr_14 (CBL1) CGS_like 485350 486640 - CGS_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7452677 Thaps9830.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0067

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0094
 0.37

Most Highly Correlated Transcripts

bd687

(bd687) NA
0.9535

bd624

(bd624) Glyco_transf_34 superfamily
0.9106

bd1820

(bd1820) Fasciclin
0.9074

bd208

(bd208) DUF3529
0.9051

262977

NA
0.9046

bd1765

(bd1765) NA
0.9028

bd1078

(bd1078) NA
0.9012

25040

NA
0.899

9512

PTZ00168
0.8974

bd719

(bd719) NA
0.8964

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step... cl18945 423.151 6.05E-146 65 - 427 specific 99738
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 423.151 6.05E-146 65 - 427 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15917 PHATRDRAFT_15917 Not available Not available 460075 Cre03.g144627.t1.1 AT3G01120.1 299659

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006520 GO:0003962 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0003962

cystathionine gamma-synthase activity

Details: 
Catalysis of the reaction: O-succinyl-L-homoserine + L-cysteine = cystathionine + succinate.
GO Category: 
MF

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