9880 SGNH_hydrolase superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9880	chr_14	SGNH_hydrolase superfamily	624307	626367	+	SGNH_hydrolase superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451258	Thaps9880.1, Thaps9880.2, Thaps9880.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0205

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0245	0.28	12000 980

Most Highly Correlated Transcripts

3354 hypothetical protein 0.9455	2145 hypothetical protein 0.9268	4353 O-FucT_like 0.9221	16295 FBPase 0.9212	22785 DUF336 0.9179	263489 WD40 0.9168
7597 2A0111 0.9158	6693 hypothetical protein 0.9157	21681 hypothetical protein 0.9148	4160 PMT_2 superfamily 0.91

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SGNH_hydrolase superfamily		SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold...	-	83.1074	4.04E-18	189 - 321	superfamily	260768

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_bd1603	PHATRDRAFT_bd1603	188800	296971	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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