PHATRDRAFT_52655 glutamate-trna ligase (PLN02627)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_52655	chr_26	glutamate-trna ligase (PLN02627)	297053	299067	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0177

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0015	0.37	210 87000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GluRS_core		catalytic core domain of discriminating glutamyl-tRNA synthetase; Discriminating Glutamyl-tRNA...	cl00015	338.792	1.31E-112	70 - 403	specific	173905
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	338.792	1.31E-112	70 - 403	superfamily	260139
PLN02627		glutamyl-tRNA synthetase	-	888.705	0	7 - 588	multi-dom	178234

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38924		Not available	214453	293526	416006	Cre07.g313700.t1.1	AT5G64050.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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