12070 (NDK1) NDPk_I
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
12070 chr_23 (NDK1) NDPk_I 295637 296391 - NDPk_I

Synonyms

NCBI ID Ensembl Genomes exon ID
7442665 Thaps12070.1, Thaps12070.2, Thaps12070.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0128
 0.43

Most Highly Correlated Transcripts

39622

NAC
0.8045

1326

sopT
0.7992

33008

PLN02338
0.7881

1888

hypothetical protein
0.7802

38139

Chloroa_b-bind
0.7794

38964

Chorismate_synthase
0.7776

23228

ilvC
0.7692

269759

hypothetical protein
0.7683

93

ELO
0.7632

39735

(RL27A) Ribosomal_L18e superfamily
0.7598

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NDPk_I Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large... cl00335 242.374 5.46E-83 2 - 131 specific 239876
NDPk superfamily Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of... - 242.374 5.46E-83 2 - 131 superfamily 260363
NDK Nucleoside diphosphate kinase; Nucleoside diphosphate kinase. - 231.593 1.11E-78 2 - 133 multi-dom 249778

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42104 PHATRDRAFT_42104 272656 196452 365588 Not available AT4G09320.1 286691

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004550 GO:0005524 GO:0006183 GO:0006228 GO:0006241 -

GO:0004550

nucleoside diphosphate kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006183

GTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.
GO Category: 
BP

GO:0006228

UTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.
GO Category: 
BP

GO:0006241

CTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.
GO Category: 
BP

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