6592 TroA-like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6592 chr_6 TroA-like superfamily 1983835 1985871 + TroA-like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446366 Thaps6592.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0194

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0247
 0.36

Most Highly Correlated Transcripts

263653

P-ATPase-V
0.9141

13427

AarF
0.9092

38991

COG1565
0.8868

6950

prc
0.8826

4445

hypothetical protein
0.8813

2564

hypothetical protein
0.8732

24639

EH
0.8709

13909

EHD
0.8694

10058

hypothetical protein
0.8688

7975

eIF1_SUI1_like superfamily
0.8681

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TroA-like superfamily Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in... - 162.469 1.60E-45 18 - 319 superfamily 260309
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 81.4991 1.24E-17 469 - 658 superfamily 260331
Peripla_BP_2 Periplasmic binding protein; This family includes bacterial periplasmic binding proteins. Several... - 83.1826 5.78E-18 19 - 301 multi-dom 250662

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35058 PHATRDRAFT_35058 179872 190979 201307 Cre06.g278168.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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