7584 pepsin_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7584 chr_8 pepsin_like 606925 611756 - pepsin_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7450174 Thaps7584.2, Thaps7584.3, Thaps7584.4, Thaps7584.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0128

Most Highly Correlated Transcripts

22922

hypothetical protein
0.9239

25811

hypothetical protein
0.9057

7121

DUF3684 superfamily
0.9039

2120

hypothetical protein
0.9024

21158

hypothetical protein
0.9021

21997

TPR_12
0.9019

24618

hypothetical protein
0.9002

24683

Raptor_N
0.8998

36937

PI3Kc_like superfamily
0.8963

24035

Peptidase_C19 superfamily
0.8956

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH; Pepsin-... cl11403 152.965 1.72E-40 520 - 905 specific 133138
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 152.965 1.72E-40 520 - 905 superfamily 264354
Asp Eukaryotic aspartyl protease; Aspartyl (acid) proteases include pepsins, cathepsins, and renins.... - 103.523 9.77E-24 520 - 906 multi-dom 249520

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31525 PHATRDRAFT_31525 Not available 262714 221566 Cre01.g051950.t1.2 AT5G43100.1 474645

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004194 GO:0006508 GO:0004190 -

GO:0004194

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004190

aspartic-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
GO Category: 
MF

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