7817 TrkAThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7817	chr_8	TrkA	1215343	1219459	-	TrkA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444963	Thaps7817.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0297

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0024	0.39

Most Highly Correlated Transcripts

bd1757 (bd1757) NA 0.8568	bd1893 (bd1893) NA 0.8299	bd463 (bd463) Aa_trans superfamily 0.829	37539 cpn10 0.827	bd1758 (bd1758) NA 0.8244	6028 NA 0.8211
bd790 (bd790) ABCC_MRP_domain2 0.803	4424 LabA_like 0.7968	268256 PLN02346 0.7951	38707 Aldolase_Class_I superfamily 0.7934

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	62.3131	7.68E-11	970 - 1163	superfamily	267487
TrkA		Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	-	90.2105	5.19E-19	966 - 1333	multi-dom	224983

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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