8019 ovoA_NtermThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8019	chr_9	ovoA_Nterm	525089	528673	+	ovoA_Nterm

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443545	Thaps8019.6, Thaps8019.2, Thaps8019.7, Thaps8019.3, Thaps8019.4, Thaps8019.5, Thaps8019.8, Thaps8019.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0313

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0211	0.43	0.64 2

Most Highly Correlated Transcripts

22918 hypothetical protein 0.79	263473 2a30 0.7837	13064 GCS superfamily 0.7796	8258 CHD 0.77	7070 hypothetical protein 0.7678	10533 hypothetical protein 0.7627
11296 (Tp_fungal_TRF3) regulator [Rayko] 0.7576	22623 KH-I 0.753	5796 hypothetical protein 0.7484	11295 (Tp_fungal_TRF2) regulator [Rayko] 0.747

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FGE-sulfatase superfamily		Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for post-...	-	122.221	1.72E-30	406 - 684	superfamily	267935
ovoA_Nterm		5-histidylcysteine sulfoxide synthase; Ovothiol A is N1-methyl-4-mercaptohistidine. In the absence...	-	656.662	0	200 - 684	multi-dom	234555

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44876	PHATRDRAFT_44876	212712	289448	73662	Cre08.g380000.t1.2	Not available	352116

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008757 GO:0005554 -

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