11296 (Tp_fungal_TRF3) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11296 chr_19b_31 (Tp_fungal_TRF3) regulator [Rayko] 102489 104796 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7451805 Thaps11296.2, Thaps11296.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0313

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0093
 0.41

Most Highly Correlated Transcripts

7070

hypothetical protein
0.8593

22918

hypothetical protein
0.8414

9449

hypothetical protein
0.8223

12899

AAA
0.8196

11295

(Tp_fungal_TRF2) regulator [Rayko]
0.818

22141

hypothetical protein
0.8097

25438

(Tp_fungal_TRF1b) regulator [Rayko]
0.808

25810

hypothetical protein
0.8068

plastidpH

0.8064

9519

ANK
0.8034

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 GO:0008270 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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