8101 TLDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8101	chr_9	TLD	775312	777305	+	TLD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453070	Thaps8101.1, Thaps8101.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0367

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0146	0.45	0.005 0.09

Most Highly Correlated Transcripts

34191 CobN_like 0.8313	263864 0.8298	263819 Fructosamin_kin superfamily 0.8148	34590 nt_trans superfamily 0.8124	11165 hypothetical protein 0.8073	263799 DUF521 0.8044
24639 EH 0.7974	262719 CHD 0.7973	263509 mutl 0.7951	10628 hypothetical protein 0.7948

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TLD		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	cl02144	100.783	8.63E-25	382 - 562	specific	254268
TLD superfamily		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	-	100.783	8.63E-25	382 - 562	superfamily	261195

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT5G39590.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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