8679 RibD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8679 chr_11a RibD 194231 195955 + RibD

Synonyms

NCBI ID Ensembl Genomes exon ID
7444540 Thaps8679.1, Thaps8679.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0161

Most Highly Correlated Transcripts

21304

hypothetical protein
0.8706

21877

hypothetical protein
0.8673

5066

hypothetical protein
0.8654

13448

Sec1
0.8638

264441

Glycos_transf_1 superfamily
0.8635

268737

hypothetical protein
0.861

2909

DnaQ_like_exo superfamily
0.8607

6532

Eapp_C superfamily
0.8604

269169

Beach
0.8589

35713

hypothetical protein
0.858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RibD Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism] cl17279 106.627 2.36E-26 131 - 426 specific 224896
RibD_C superfamily RibD C-terminal domain; The function of this domain is not known, but it is thought to be involved... - 106.627 2.36E-26 131 - 426 superfamily 266607

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47432 PHATRDRAFT_47432 180826 218725 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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