8750 Reelin_subrepeat_NtThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8750	chr_11a	Reelin_subrepeat_Nt	416214	419148	-	Reelin_subrepeat_Nt

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443303	Thaps8750.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0412

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0011	0.46	23000000 7400

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9176	bd716 (bd716) MviM 0.8921	4047 hypothetical protein 0.8687	263610 COG3899 0.8597	21580 RNB 0.8568	4672 hypothetical protein 0.8532
8733 hypothetical protein 0.8469	25622 hypothetical protein 0.8444	263599 COG3899 0.8395	1216 hypothetical protein 0.838

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Reelin_subrepeat_Nt		Additional N-terminal subrepeat of reelin; Reelin is an extracellular glycoprotein involved in...	cl15240	186.523	2.14E-54	361 - 528	specific	197344
Reelin_subrepeat_like superfamily		Tandem repeat subunit of reelin and related proteins; Reelin is an extracellular glycoprotein...	-	186.523	2.14E-54	361 - 528	superfamily	197448

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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